PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_6DS_691A715BD.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 175aa MW: 19716.3 Da PI: 8.51

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_6DS_691A715BD.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.9	1.9e-07	70	112	21	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 RqRKk+++ e ++ v +L eN++L +e+ el+ +++l +e+ Traes_6DS_691A715BD.1 70 RQRKKMRLPEVQQLVRSLAVENESLHEEMRELQRACSALSKEN 112 9**************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.8E-4	70	108	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence Send to blast
FGLVSVRDVL GRGSCCGLWF HPPSWSVIRC SLIGLVWLLT TAHYPSLQVG SIRRPQLTFQ 60 APPPRPAGQR QRKKMRLPEV QQLVRSLAVE NESLHEEMRE LQRACSALSK ENDKLETRIV 120 EQSNSRNEAT LKEQKGKQQQ LDQQQQQQQQ SPHDSFALPD LNLPAQDGAD GSVPC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	75	RQRKKMR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK364210	1e-147	AK364210.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2022L02.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010233917.1	2e-52	PREDICTED: uncharacterized protein LOC100835852
TrEMBL	W5H317	1e-126	W5H317_WHEAT; Uncharacterized protein
STRING	MLOC_36367.1	2e-67	(Hordeum vulgare)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3790	29	51

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148]